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Annotation Overview for fig|394221.5.peg.1435 in Maricaulis maris MCS10:
Kynurenine formamidase, bacterial (EC 3.5.1.9)

current assignmentKynurenine formamidase, bacterial (EC 3.5.1.9)EC Number 3.5.1.9
taxonomy id394221contig
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FigFamFIG001524
data base cross references
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This feature is part of a subsystem
  • In NAD and NADP cofactor biosynthesis global its role is Kynurenine formamidase, bacterial (EC 3.5.1.9).
  • In Aromatic amino acid degradation its role is Kynurenine formamidase, bacterial (EC 3.5.1.9). However, the functionality of this subsystem has not yet been classified for this organism.
  • Reasons for Current Assignment

    We have assigned the function "Kynurenine formamidase, bacterial (EC 3.5.1.9)" to the encoded protein. The protein occurs in 2 subsystems: "NAD and NADP cofactor biosynthesis global", and "Pseudomonas quinolone signal PQS". In "NAD and NADP cofactor biosynthesis global", it appears to play a functional role that we have not associated with any other gene, and it occurs in close proximity on the chromosome with 3 other genes from the same subsystem.

    Compare Regions

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.






    Topic revision: r6 - 02 Mar 2009 - 22:06:54 - Bruce Parrello
     
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    NMPDR is a collaboration among researchers from the Computation Institute of the University of Chicago, the Fellowship for Interpretation of Genomes (FIG), Argonne National Laboratory, and the National Center for Supercomputing Applications (NCSA) at the University of Illinois. NMPDR is funded by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Contract HHSN266200400042C. Banner images are copyright © Dennis Kunkel.